Pairwise Alignments

Query, 213 a.a., HTH-type transcriptional repressor FabR from Vibrio cholerae E7946 ATCC 55056

Subject, 205 a.a., DNA-binding transcriptional repressor FabR (RefSeq) from Shewanella loihica PV-4

 Score =  264 bits (675), Expect = 8e-76
 Identities = 143/205 (69%), Positives = 169/205 (82%), Gaps = 2/205 (0%)

Query: 4   LGIRAQQKEKTRRSLIDAAFSQLSADRSFSNLSLREVAREAGIAPTSFYRHFKDMDELGL 63
           +GIRAQQKEKTRR+L+DAAF+QLSA+RSFS+LSLREVAREA IAPTSFYRHFKDM+ELGL
Sbjct: 2   MGIRAQQKEKTRRALVDAAFNQLSAERSFSSLSLREVAREANIAPTSFYRHFKDMNELGL 61

Query: 64  TMVDEGGLLLRQLMRQARQRIVKEGSVIRTSVETFMEFIESSPNVFRLLLRERSGTSCEF 123
           TMVDEGGL LRQ+MR+ RQR    GSVIR SV+TFME +ES+PNVFR+LL ERSGTS  F
Sbjct: 62  TMVDEGGLTLRQMMRKGRQRAEAGGSVIRISVDTFMEVLESNPNVFRILLHERSGTSAPF 121

Query: 124 RAAVVREIQHFAAELTEYLVA-TGMTREEAMTQAEASVTLVFSSGAEALDLDRRERDELA 182
           RAAV REI+HF +EL  Y  A T  T E A  QAEA VTLVF++GA ALD+ R +R  LA
Sbjct: 122 RAAVAREIEHFISELAHYTEATTKRTPELARAQAEALVTLVFNAGAAALDMKRVDRKILA 181

Query: 183 ERLIMQLRMLAKGAHWYRKERERHR 207
           +RL++QLRM+AKGA   +++ E HR
Sbjct: 182 DRLVIQLRMVAKGAESLQQKME-HR 205