Pairwise Alignments

Query, 213 a.a., HTH-type transcriptional repressor FabR from Vibrio cholerae E7946 ATCC 55056

Subject, 205 a.a., DNA-binding transcriptional repressor FabR from Marinobacter adhaerens HP15

 Score =  220 bits (561), Expect = 1e-62
 Identities = 122/203 (60%), Positives = 150/203 (73%), Gaps = 5/203 (2%)

Query: 4   LGIRAQQKEKTRRSLIDAAFSQLSADRSFSNLSLREVAREAGIAPTSFYRHFKDMDELGL 63
           +  RA+QK+KTRR+L+DAA SQLSADR F +LSLREVAREAGIAPTSFYRHF ++DELGL
Sbjct: 1   MATRAEQKQKTRRALMDAALSQLSADRGFGSLSLREVAREAGIAPTSFYRHFAELDELGL 60

Query: 64  TMVDEGGLLLRQLMRQARQRIVKE-GSVIRTSVETFMEFIESSPNVFRLLLRERSGTSCE 122
            +VDEGG+ LRQLMRQAR+RI ++ GS I TSVETFME++ ++ N+FRL+LRER+G S  
Sbjct: 61  ALVDEGGVALRQLMRQARKRIARDGGSAISTSVETFMEYLGNNANLFRLMLRERTGVSKP 120

Query: 123 FRAAVVREIQHFAAELTEYL--VATGMTR--EEAMTQAEASVTLVFSSGAEALDLDRRER 178
           FR AV  EI HF  EL + L  +A    +   EA   AEA VTLVF+ GAEALD    ER
Sbjct: 121 FRTAVKAEIDHFVTELADDLRRIADEQNKPLSEARLVAEAMVTLVFNQGAEALDATASER 180

Query: 179 DELAERLIMQLRMLAKGAHWYRK 201
           DEL  +L  +LRM+  G+    K
Sbjct: 181 DELKAKLKTELRMILVGSQTLAK 203