Pairwise Alignments

Query, 213 a.a., HTH-type transcriptional repressor FabR from Vibrio cholerae E7946 ATCC 55056

Subject, 204 a.a., transcriptional regulator, TetR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  263 bits (673), Expect = 1e-75
 Identities = 139/194 (71%), Positives = 163/194 (84%), Gaps = 1/194 (0%)

Query: 4   LGIRAQQKEKTRRSLIDAAFSQLSADRSFSNLSLREVAREAGIAPTSFYRHFKDMDELGL 63
           +GIRAQQKEKTRR+L+DAAF+QLSA+RSFS+LSLREVAREA IAPTSFYRHFKDM+ELGL
Sbjct: 1   MGIRAQQKEKTRRALVDAAFNQLSAERSFSSLSLREVAREANIAPTSFYRHFKDMNELGL 60

Query: 64  TMVDEGGLLLRQLMRQARQRIVKEGSVIRTSVETFMEFIESSPNVFRLLLRERSGTSCEF 123
           TMVDEGGL LRQ+MR+ RQR    GSVIR SV+TFME ++S+PNVFR+LL ERSGTS  F
Sbjct: 61  TMVDEGGLTLRQMMRKGRQRAEAGGSVIRISVDTFMEVLDSNPNVFRILLHERSGTSAAF 120

Query: 124 RAAVVREIQHFAAELTEYLVAT-GMTREEAMTQAEASVTLVFSSGAEALDLDRRERDELA 182
           RAAV REI+HF +EL  Y  AT G T   A  QAEA VTLVF++GA ALD+ R +R  LA
Sbjct: 121 RAAVAREIEHFISELAHYTEATAGRTPMLARAQAEALVTLVFNAGASALDMKRADRKVLA 180

Query: 183 ERLIMQLRMLAKGA 196
           ++L+MQLRM+AKGA
Sbjct: 181 DQLVMQLRMVAKGA 194