Pairwise Alignments

Query, 286 a.a., RNA polymerase sigma factor RpoH from Vibrio cholerae E7946 ATCC 55056

Subject, 285 a.a., RNA polymerase sigma factor RpoH from Enterobacter sp. TBS_079

 Score =  412 bits (1058), Expect = e-120
 Identities = 198/283 (69%), Positives = 241/283 (85%)

Query: 1   MTNQAYPMALVSQDSLDSYIRSVNGYPMLSADEERELAERLHYKGDIDAAKGLILSHLRF 60
           MT +   +AL    +L+SYIR+ N +PML+A+EE+ELAE+LHY+GD++AAK LILSHLRF
Sbjct: 1   MTKEMQTLALAPVGNLESYIRAANTWPMLTAEEEKELAEKLHYQGDLEAAKKLILSHLRF 60

Query: 61  VVHVARGYSGYGLPMADLVQEGNIGLMKAVKRFNPEMGVRLVSFAVHWIKAEIHEYVLRN 120
           VVH+AR Y+GYGLP ADL+QEGNIGLMKAV+RFNPE+GVRLVSFAVHWIKAEIHEYVLRN
Sbjct: 61  VVHIARNYAGYGLPQADLIQEGNIGLMKAVRRFNPEVGVRLVSFAVHWIKAEIHEYVLRN 120

Query: 121 WRIVKIATTKAQRKLFFNLRKSKKRLGWFNNGEVETVARELGVEPAEVREMESRLAAQDA 180
           WRIVK+ATTKAQRKLFFNLRK+K+RLGWFN  EVE VARELGV   +VREMESR+AAQD 
Sbjct: 121 WRIVKVATTKAQRKLFFNLRKTKQRLGWFNQDEVEMVARELGVSSKDVREMESRMAAQDM 180

Query: 181 AFEMSAEDDENGMAYTAPVLYLEDKHSDLADNLEAENWEAHTTQRLSMALASLDERSQHI 240
            F+MS++DD +     APVLYL+DK S+ AD +E +NWE     +L+ A+  LDERSQ I
Sbjct: 181 TFDMSSDDDGSDSQPMAPVLYLQDKTSNFADGIEEDNWEDQAANKLTSAMEGLDERSQDI 240

Query: 241 VRARWLDDDNKTTLQDLAEMYGVSAERIRQLEKNAMRKLKEAV 283
           +RARWLD+DNK+TLQ+LA+ YGVSAER+RQLEKNAM+KL+ A+
Sbjct: 241 IRARWLDEDNKSTLQELADRYGVSAERVRQLEKNAMKKLRAAI 283