Pairwise Alignments

Query, 391 a.a., signal recognition particle-docking protein FtsY from Vibrio cholerae E7946 ATCC 55056

Subject, 458 a.a., Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1) from Pseudomonas fluorescens FW300-N2E2

 Score =  147 bits (370), Expect = 8e-40
 Identities = 98/297 (32%), Positives = 152/297 (51%), Gaps = 21/297 (7%)

Query: 89  FARLKRSLSRTKANIGAGFFGLFKGKKIDDDLFEELEE---QLLIADVGMDTTSKIIANL 145
           F  L   LS+T  ++        K K  +D++ + L E    LL ADV +      + ++
Sbjct: 2   FENLTDRLSQTLRHVTG------KAKLTEDNIKDTLREVRMALLEADVALPVVKDFVNSV 55

Query: 146 TARAS----RQQLRDGEALYGLLKEEMAEILSQVEQPLVIDTEKKPYVILMVGVNGVGKT 201
             RA      + L  G+A   +++ E+  ++    + L +     P V+LM G+ G GKT
Sbjct: 56  KERAVGTEVSRSLTPGQAFVKIVQAELESLMGAANEDLNLSAVP-PAVVLMAGLQGAGKT 114

Query: 202 TTIGKLAKQFQAQGKK-VMLAAGDTFRAAAVEQLQVWGERNQVPVIAQHTGADSASVIYD 260
           TT GKLA+  + + KK VM+ + D +R AA++QL+       V             +   
Sbjct: 115 TTAGKLARFLKERKKKSVMVVSADIYRPAAIKQLETLANDIGVTFFPSDLSQKPVDIAQA 174

Query: 261 AIEAAKARGIDVVIADTAGRLQNKSNLMEELRKIVRVMKKIDDSAPHEIMLTLDAGTGQN 320
           AI+ AK + IDVVI DTAGRL     +M E++ +   +       P E +  +DA TGQ+
Sbjct: 175 AIKEAKLKFIDVVIVDTAGRLHIDEEMMGEIKALHAAIN------PVETLFVVDAMTGQD 228

Query: 321 AISQAKLFSDVAPITGITLTKLDGTAKGGVIFAIADQFQIPIRYIGVGEKIDDLRPF 377
           A + AK F D  P+TG+ LTK+DG A+GG   ++      PI++IG+GEK + L PF
Sbjct: 229 AANTAKAFGDALPLTGVILTKVDGDARGGAALSVRAITGKPIKFIGMGEKSEALEPF 285