Pairwise Alignments

Query, 391 a.a., signal recognition particle-docking protein FtsY from Vibrio cholerae E7946 ATCC 55056

Subject, 505 a.a., signal recognition particle-docking protein FtsY from Pseudomonas syringae pv. syringae B728a

 Score =  419 bits (1077), Expect = e-122
 Identities = 229/388 (59%), Positives = 276/388 (71%), Gaps = 16/388 (4%)

Query: 19  EKSQTTATDTQTQDEP---QSQADVEAVAIQTETALTETETETETETETETETETATVEP 75
           E+S         + EP   +  AD+  + +  E  L +   E E E E E     A  +P
Sbjct: 117 EQSHAPVAPEPLEPEPVVAEPVADIVPLGMP-EPVLVQPVAEPEPEPEPEPVVAQAVPQP 175

Query: 76  -----------ARIVEQEKPTESFFARLKRSLSRTKANIGAGFFGLFKGKK-IDDDLFEE 123
                      A   E E     FFARLK+ LS+T A+IG G   LF GKK IDDDL EE
Sbjct: 176 VQPAAQALAVPAPAPESETGKVGFFARLKQGLSKTSASIGEGMASLFLGKKAIDDDLLEE 235

Query: 124 LEEQLLIADVGMDTTSKIIANLTARASRQQLRDGEALYGLLKEEMAEILSQVEQPLVIDT 183
           +E +LL ADVG++ TS II +LT + +R+QL D +ALY  L+ E+A +L  VEQPLVI  
Sbjct: 236 IETRLLTADVGVEATSVIIKSLTQKVARKQLTDAQALYTSLQGELAAMLKPVEQPLVIKA 295

Query: 184 EKKPYVILMVGVNGVGKTTTIGKLAKQFQAQGKKVMLAAGDTFRAAAVEQLQVWGERNQV 243
           E KP+VIL+VGVNG GKTTTIGKLAK+ Q +GKKVMLAAGDTFRAAAVEQLQVWGERN +
Sbjct: 296 EHKPFVILVVGVNGAGKTTTIGKLAKKLQLEGKKVMLAAGDTFRAAAVEQLQVWGERNHI 355

Query: 244 PVIAQHTGADSASVIYDAIEAAKARGIDVVIADTAGRLQNKSNLMEELRKIVRVMKKIDD 303
           PVIAQHTGADSASVI+DA++AAKARGIDV+IADTAGRL  K NLMEEL+K+ RV+ K+D 
Sbjct: 356 PVIAQHTGADSASVIFDAVQAAKARGIDVLIADTAGRLHTKDNLMEELKKVRRVIGKLDA 415

Query: 304 SAPHEIMLTLDAGTGQNAISQAKLFSDVAPITGITLTKLDGTAKGGVIFAIADQFQIPIR 363
            APHE++L LDAGTGQNAI+QAK F+    +TG+ LTKLDGTAKGGVIFA+A QF +PIR
Sbjct: 416 DAPHEVLLVLDAGTGQNAINQAKQFNQTVTLTGLALTKLDGTAKGGVIFALAKQFGLPIR 475

Query: 364 YIGVGEKIDDLRPFATQEFIDALFSREE 391
           YIGVGE IDDLR F  + F+ ALF+  E
Sbjct: 476 YIGVGEGIDDLRTFEAEPFVQALFAERE 503



 Score = 25.0 bits (53), Expect = 0.005
 Identities = 19/71 (26%), Positives = 29/71 (40%), Gaps = 3/71 (4%)

Query: 5  KKRGLLSWLGFGDEEKSQTTATDTQTQDEPQSQADVEAVAIQTETALTETETETETETET 64
          +K+GL  WL    ++     A  + TQ +P   AD  A   Q E  +  +++  E   E 
Sbjct: 16 EKKGLFGWLRKKPQQTEPKPAESSPTQPDP--IADQVAATPQVEPHVA-SQSVPEVTVEA 72

Query: 65 ETETETATVEP 75
                  VEP
Sbjct: 73 AAPASQLHVEP 83