Pairwise Alignments

Query, 391 a.a., signal recognition particle-docking protein FtsY from Vibrio cholerae E7946 ATCC 55056

Subject, 458 a.a., signal recognition particle subunit FFH/SRP54 (srp54) from Pseudomonas syringae pv. syringae B728a

 Score =  153 bits (386), Expect = 1e-41
 Identities = 102/297 (34%), Positives = 156/297 (52%), Gaps = 21/297 (7%)

Query: 89  FARLKRSLSRTKANIGAGFFGLFKGKKIDDDLFEELEE---QLLIADVGMDTTSKIIANL 145
           F  L   LS+T  ++        K K  +D++ + L E    LL ADV +      + N+
Sbjct: 2   FENLTDRLSQTLRHVTG------KAKLNEDNIKDTLREVRMALLEADVALPVVKDFVNNV 55

Query: 146 TARAS----RQQLRDGEALYGLLKEEMAEILSQVEQPLVIDTEKKPYVILMVGVNGVGKT 201
             RA      + L  G+A   +++ E+  ++    + LV++    P VILM G+ G GKT
Sbjct: 56  KERAVGTEVSRSLTPGQAFVKIVQAELESLMGAANEDLVLNVTP-PAVILMAGLQGAGKT 114

Query: 202 TTIGKLAKQFQAQGKK-VMLAAGDTFRAAAVEQLQVWGERNQVPVIAQHTGADSASVIYD 260
           TT GKLA+  + + KK VM+ + D +R AA++QL+       V   A         +   
Sbjct: 115 TTAGKLARFLKERKKKTVMVVSVDVYRPAAIKQLETLANDIGVTFFASDISQKPVDIAQA 174

Query: 261 AIEAAKARGIDVVIADTAGRLQNKSNLMEELRKIVRVMKKIDDSAPHEIMLTLDAGTGQN 320
           AI+ A+ + IDVVI DTAGRL     +M E++ +   +K      P E +  +DA TGQ+
Sbjct: 175 AIKEARLKFIDVVIVDTAGRLHVDVEMMGEIQALHAAVK------PAETLFVVDAMTGQD 228

Query: 321 AISQAKLFSDVAPITGITLTKLDGTAKGGVIFAIADQFQIPIRYIGVGEKIDDLRPF 377
           A + AK F D  P+TG+ LTK+DG A+GG   ++      PI++IG+GEK + L PF
Sbjct: 229 AANTAKAFGDALPLTGVILTKVDGDARGGAALSVRAITGKPIKFIGMGEKSEALEPF 285