Pairwise Alignments

Query, 391 a.a., signal recognition particle-docking protein FtsY from Vibrio cholerae E7946 ATCC 55056

Subject, 496 a.a., signal recognition particle subunit FFH/SRP54 (srp54) from Synechococcus elongatus PCC 7942

 Score =  166 bits (420), Expect = 1e-45
 Identities = 93/263 (35%), Positives = 146/263 (55%), Gaps = 11/263 (4%)

Query: 119 DLFEELEEQLLIADVGMDTTSKIIANLTARASRQQ----LRDGEALYGLLKEEMAEILSQ 174
           +  +E+   LL ADV +    + IA +  +A   Q    +R  +    ++ +E+ +++ +
Sbjct: 40  EALKEVRRALLEADVNLGVVKEFIAQVQEKAVGTQVISGIRPDQQFIKVVYDELVQVMGE 99

Query: 175 VEQPLVIDTEKKPYVILMVGVNGVGKTTTIGKLAKQFQAQGKKVMLAAGDTFRAAAVEQL 234
              PL     K P VILM G+ G GKTT   KLA   + +G+  +L A D +R AA++QL
Sbjct: 100 THVPLA-QAAKAPTVILMAGLQGAGKTTATAKLALHLRKEGRSTLLVATDVYRPAAIDQL 158

Query: 235 QVWGERNQVPVIAQHTGADSASVIYDAIEAAKARGIDVVIADTAGRLQNKSNLMEELRKI 294
              G++  VPV    + A+   +    +E A+  GID VI DTAGRLQ  + +MEEL ++
Sbjct: 159 ITLGKQIDVPVFELGSDANPVEIARQGVEKARQEGIDTVIVDTAGRLQIDTEMMEELAQV 218

Query: 295 VRVMKKIDDSAPHEIMLTLDAGTGQNAISQAKLFSDVAPITGITLTKLDGTAKGGVIFAI 354
              +      APHE++L +D+  GQ A S  + F +   ITG  LTKLDG ++GG   +I
Sbjct: 219 KEAI------APHEVLLVVDSMIGQEAASLTRSFHERIGITGAILTKLDGDSRGGAALSI 272

Query: 355 ADQFQIPIRYIGVGEKIDDLRPF 377
                 PI+++G+GEK++ L+PF
Sbjct: 273 RRVSGQPIKFVGLGEKVEALQPF 295