Pairwise Alignments

Query, 391 a.a., signal recognition particle-docking protein FtsY from Vibrio cholerae E7946 ATCC 55056

Subject, 504 a.a., Signal recognition particle protein (NCBI) from Rhodospirillum rubrum S1H

 Score =  142 bits (359), Expect = 2e-38
 Identities = 96/277 (34%), Positives = 152/277 (54%), Gaps = 20/277 (7%)

Query: 118 DDLFEELEEQLLIADVGMDTTSKIIANLTARASRQQL----RDGEALYGLLKEEMAEILS 173
           D    E+   LL ADV +    + +A +  +A  Q++      G+ +  L+ + + ++LS
Sbjct: 28  DAAMREVRVALLEADVALAVVKQFVAQVKEQAIGQEVIRSVTPGQMVVKLVHDALVDMLS 87

Query: 174 Q---VE-----QPLVIDTEKKPYV-ILMVGVNGVGKTTTIGKLAKQF-QAQGKKVMLAAG 223
               VE       L ID    P V ILMVG+ G GKTTT  K+A +  + + KKV++A+ 
Sbjct: 88  GEGGVEAEPDPMSLGIDIAHTPPVPILMVGLQGSGKTTTSAKIALRITKRERKKVLMASL 147

Query: 224 DTFRAAAVEQLQVWGERNQVPVIAQHTGADSASVIYDAIEAAKARGIDVVIADTAGRLQN 283
           D +R AA  QL + GE+  V  +    G     +   A++AA+  G DVVI DTAGRL  
Sbjct: 148 DVYRPAAQRQLAILGEQTGVDTLEVVMGQKPVEIARRAMQAARVGGYDVVILDTAGRLHI 207

Query: 284 KSNLMEELRKIVRVMKKIDDSAPHEIMLTLDAGTGQNAISQAKLFSDVAPITGITLTKLD 343
              LM E+ ++  ++       PHE++L  DA TGQ+A++ A+ F++   +TGI LT++D
Sbjct: 208 DEVLMTEVAEVRALVN------PHEVLLVTDAMTGQDAVNVAQEFNEKVGVTGIVLTRVD 261

Query: 344 GTAKGGVIFAIADQFQIPIRYIGVGEKIDDLRPFATQ 380
           G ++GG   ++     +PI+ +G+GEK+D L  F  Q
Sbjct: 262 GDSRGGAALSMRAVTGVPIKLMGMGEKMDALEAFHAQ 298