Pairwise Alignments

Query, 391 a.a., signal recognition particle-docking protein FtsY from Vibrio cholerae E7946 ATCC 55056

Subject, 457 a.a., signal recognition particle protein (RefSeq) from Shewanella loihica PV-4

 Score =  159 bits (402), Expect = 2e-43
 Identities = 100/297 (33%), Positives = 160/297 (53%), Gaps = 21/297 (7%)

Query: 89  FARLKRSLSRTKANIGAGFFGLFKGKKIDDDLFEELEE---QLLIADVGMDTTSKIIANL 145
           F  L   LSRT  NI        +G+  +D++ E L E    LL ADV +      + ++
Sbjct: 2   FENLTDRLSRTLKNISG------RGRLTEDNIKETLREVRMALLEADVALPVVRAFVNSV 55

Query: 146 TARASRQQ----LRDGEALYGLLKEEMAEILSQVEQPLVIDTEKKPYVILMVGVNGVGKT 201
             RA  Q+    L  G+A   +++ E+   + +  + L +  +  P VI+M G+ G GKT
Sbjct: 56  KDRAVGQEVTKSLSPGQAFIKIVQSELENAMGEANEALNLSAQP-PAVIMMAGLQGAGKT 114

Query: 202 TTIGKLAKQFQAQGKK-VMLAAGDTFRAAAVEQLQVWGERNQVPVIAQHTGADSASVIYD 260
           T++ KL+K  + + KK V++ + D +R AA++QL+      +V             ++  
Sbjct: 115 TSVAKLSKFLRERQKKSVLVVSADVYRPAAIKQLETLANEVEVEFFPSDVSQKPIDIVDA 174

Query: 261 AIEAAKARGIDVVIADTAGRLQNKSNLMEELRKIVRVMKKIDDSAPHEIMLTLDAGTGQN 320
           A+  AK + IDVVI DTAGRL    ++M+E++ +   +K      P E +  +DA TGQ+
Sbjct: 175 AMAHAKLKFIDVVIVDTAGRLHVDESMMDEIKALHAAVK------PVETLFVVDAMTGQD 228

Query: 321 AISQAKLFSDVAPITGITLTKLDGTAKGGVIFAIADQFQIPIRYIGVGEKIDDLRPF 377
           A + AK F++  P+TG+ LTK+DG A+GG   +I      PI+++GVGEK D L PF
Sbjct: 229 AANTAKAFNEALPLTGVVLTKVDGDARGGAALSIRHITGKPIKFLGVGEKTDALEPF 285