Pairwise Alignments

Query, 391 a.a., signal recognition particle-docking protein FtsY from Vibrio cholerae E7946 ATCC 55056

Subject, 551 a.a., signal recognition particle protein from Bifidobacterium breve UCC2003

 Score =  142 bits (359), Expect = 2e-38
 Identities = 100/290 (34%), Positives = 139/290 (47%), Gaps = 31/290 (10%)

Query: 112 KGKKIDDDL---FEELEEQLLIADVGMDTTSKIIANLTARAS----RQQLRDGEALYGLL 164
           KGK  + D+     E+   LL ADV +D        +  RA      + L   + +  ++
Sbjct: 21  KGKLSEADIDGTIREIRRALLDADVALDVVRSFTGKVRERALGTEVSEALNPAQQVVKIV 80

Query: 165 KEEMAEILSQ-VEQPLVIDTEKKPYVILMVGVNGVGKTTTIGKLAKQFQAQGKKVMLAAG 223
            EE+ ++L Q V++PL    +  P +I++ G+ G GKTT  GKL    +  G   +L A 
Sbjct: 81  NEELTDVLGQGVDRPLNF-AKNPPTIIMLAGLQGAGKTTLAGKLGYWLKDSGHTPLLVAA 139

Query: 224 DTFRAAAVEQLQVWGERNQVPVIAQ----------------HTGADSASVIYDAIEAAKA 267
           D  R  AV QLQV GER  VPV A                  T  D   V  D+IE AK 
Sbjct: 140 DLQRPNAVTQLQVVGERAGVPVYAPEKGVQSDGGEAVAAPGQTSGDPVKVARDSIEIAKQ 199

Query: 268 RGIDVVIADTAGRLQNKSNLMEELRKIVRVMKKIDDSAPHEIMLTLDAGTGQNAISQAKL 327
           +  D VI DTAGRL     LM++ R I       D   P+EI+  +DA  GQ+A+  AK 
Sbjct: 200 KLYDTVIIDTAGRLGVDEELMKQARDI------RDAVQPNEILFVIDAMIGQDAVKTAKA 253

Query: 328 FSDVAPITGITLTKLDGTAKGGVIFAIADQFQIPIRYIGVGEKIDDLRPF 377
           F +    TG+ L+KLDG A+GG   ++A     PI +   GE + D   F
Sbjct: 254 FDEGVDFTGVVLSKLDGDARGGAALSVASVTGKPILFASTGEGLKDFEVF 303