Pairwise Alignments

Query, 391 a.a., signal recognition particle-docking protein FtsY from Vibrio cholerae E7946 ATCC 55056

Subject, 562 a.a., signal recognition particle-docking protein FtsY (RefSeq) from Shewanella sp. ANA-3

 Score =  472 bits (1215), Expect = e-137
 Identities = 243/376 (64%), Positives = 300/376 (79%), Gaps = 4/376 (1%)

Query: 19  EKSQTTATDTQTQDEPQSQADVEAVAIQTETALTETETETETETETETETETATVEPA-- 76
           E ++  A   Q +     +A+ E +A + + A  + E E + E E     +    +P   
Sbjct: 185 EAARLAAEQAQAEQLAAEKAEAERIAAE-QAAAAQAEAEAQAEAERIAAAQIQAEQPLEQ 243

Query: 77  RIVEQEKPT-ESFFARLKRSLSRTKANIGAGFFGLFKGKKIDDDLFEELEEQLLIADVGM 135
           +   Q KP  ESFFARLKR L RT  NIG+GF GLF+GKKIDDDLFEELEEQLLIADVG+
Sbjct: 244 QPEPQAKPAKESFFARLKRGLMRTSENIGSGFIGLFRGKKIDDDLFEELEEQLLIADVGV 303

Query: 136 DTTSKIIANLTARASRQQLRDGEALYGLLKEEMAEILSQVEQPLVIDTEKKPYVILMVGV 195
           +TTS++I +LT  ASR+QL+D EALY LL++EM + L  V  PLV +    PYVILMVGV
Sbjct: 304 ETTSRLIKSLTEHASRKQLKDAEALYELLRDEMQKTLDPVAIPLVPENANGPYVILMVGV 363

Query: 196 NGVGKTTTIGKLAKQFQAQGKKVMLAAGDTFRAAAVEQLQVWGERNQVPVIAQHTGADSA 255
           NGVGKTTTIGKLAKQ+Q QGK VMLAAGDTFRAAAVEQLQVWG+RN +PV+AQHTGADSA
Sbjct: 364 NGVGKTTTIGKLAKQYQRQGKTVMLAAGDTFRAAAVEQLQVWGQRNNIPVVAQHTGADSA 423

Query: 256 SVIYDAIEAAKARGIDVVIADTAGRLQNKSNLMEELRKIVRVMKKIDDSAPHEIMLTLDA 315
           SV++DA++AAKAR ID++IADTAGRLQNKS+LMEEL+K+VRVMKK+D  APHE+MLTLDA
Sbjct: 424 SVLFDALQAAKARKIDILIADTAGRLQNKSHLMEELKKVVRVMKKLDPEAPHEVMLTLDA 483

Query: 316 GTGQNAISQAKLFSDVAPITGITLTKLDGTAKGGVIFAIADQFQIPIRYIGVGEKIDDLR 375
            TGQNAISQA+LF +   +TG+T++KLDGTAKGGV+FAIAD+F+IP+RYIGVGE+IDDLR
Sbjct: 484 STGQNAISQAQLFQEAVGVTGMTISKLDGTAKGGVVFAIADKFKIPLRYIGVGEQIDDLR 543

Query: 376 PFATQEFIDALFSREE 391
            F ++EFIDALF++E+
Sbjct: 544 TFNSKEFIDALFTQEK 559