Pairwise Alignments

Query, 199 a.a., 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD from Vibrio cholerae E7946 ATCC 55056

Subject, 266 a.a., 16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171) from Xanthomonas campestris pv. campestris strain 8004

 Score =  150 bits (380), Expect = 2e-41
 Identities = 84/185 (45%), Positives = 114/185 (61%), Gaps = 5/185 (2%)

Query: 14  APTGQVRIISGLWRGRKLPVHDAEGLRPTTDRVKETLFNWLAQEVPNARCLDLFAGSGGL 73
           A  GQVRI+ G WR  +L V    GLRP++DRV+ETLFNWL   +  AR LDLFAGSG L
Sbjct: 70  AAEGQVRIVGGRWRNTRLSVPQLPGLRPSSDRVRETLFNWLLPRLAGARVLDLFAGSGAL 129

Query: 74  GFECASRQANQVTMLELNPLAFQQLKTNVQSLKA-ENIELIHTDALAFL-RQSGKPYDVV 131
           G E  SR A    ++E +P   Q+L+ +V  L+A E ++++  DAL +L R      D+V
Sbjct: 130 GLEAVSRGAAHALLIERDPGLAQRLREHVARLRATEQVQVLQDDALRWLERAPTSQVDLV 189

Query: 132 FIDPPFRQGLLQETTQLLEQNGWLAPQAMIYIECEKELPLTELPPHWHLHREKSAGQVCY 191
           F+DPPF  GL     + L  +  LA +A +Y+E   ELP  ++PP WHLHRE +  +V Y
Sbjct: 190 FVDPPFAAGLWAPVLERLSPH--LAAEAWLYLETPAELP-PQVPPGWHLHREGATREVRY 246

Query: 192 RLFIR 196
            L+ R
Sbjct: 247 ALYRR 251