Pairwise Alignments

Query, 199 a.a., 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD from Vibrio cholerae E7946 ATCC 55056

Subject, 196 a.a., 16S rRNA m(2)G-966 methyltransferase from Pseudomonas syringae pv. syringae B728a

 Score =  173 bits (438), Expect = 2e-48
 Identities = 93/181 (51%), Positives = 111/181 (61%), Gaps = 1/181 (0%)

Query: 17  GQVRIISGLWRGRKLPVHDAEGLRPTTDRVKETLFNWLAQEVPNARCLDLFAGSGGLGFE 76
           GQ+RII G W  R+L   DA GLRPT DRV+ETLFNWLA  +  AR LD+F GSG L FE
Sbjct: 13  GQLRIIGGEWGSRRLTFPDAPGLRPTPDRVRETLFNWLAPYIAGARVLDVFTGSGALFFE 72

Query: 77  CASRQANQVTMLELNPLAFQQLKTNVQSLKAENIELIHTDALAFLR-QSGKPYDVVFIDP 135
             SR A+    L+ N  A   L+ N+ +L   + ++  TDAL  L   +  P+DVVF+DP
Sbjct: 73  ALSRGASMGLALDSNAAAIASLRQNLNALNCTSGQVSQTDALRHLETAAASPFDVVFLDP 132

Query: 136 PFRQGLLQETTQLLEQNGWLAPQAMIYIECEKELPLTELPPHWHLHREKSAGQVCYRLFI 195
           PF QGLL     LLE +GWLA  A IY E E     T LP  W LHREK AGQV Y L+ 
Sbjct: 133 PFHQGLLASACNLLESHGWLADTAWIYTESETPPSTTGLPGTWRLHREKKAGQVYYALWQ 192

Query: 196 R 196
           R
Sbjct: 193 R 193