Pairwise Alignments

Query, 199 a.a., 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD from Vibrio cholerae E7946 ATCC 55056

Subject, 247 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 40.4 bits (93), Expect = 3e-08
 Identities = 29/83 (34%), Positives = 41/83 (49%), Gaps = 2/83 (2%)

Query: 64  LDLFAGSGGLGFECASRQANQVTMLELNPLAFQQLKTNVQ-SLKAENIELIHTDALAFLR 122
           LDL AGSG L    A R    +T +E++P+A    ++N   S   + I LI  DA     
Sbjct: 53  LDLGAGSGLLALMAAQRCKAPITAIEIDPVAASACRSNFSASPWPDRINLIEADATDAEA 112

Query: 123 QSGKPYDVVFIDPP-FRQGLLQE 144
            +GK +  +  +PP F  G L E
Sbjct: 113 LAGKVFTHILCNPPYFETGPLSE 135