Pairwise Alignments

Query, 199 a.a., 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD from Vibrio cholerae E7946 ATCC 55056

Subject, 193 a.a., 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD from Rhodanobacter denitrificans MT42

 Score =  166 bits (419), Expect = 3e-46
 Identities = 88/185 (47%), Positives = 117/185 (63%), Gaps = 1/185 (0%)

Query: 12  KKAPTGQVRIISGLWRGRKLPVHDAEGLRPTTDRVKETLFNWLAQEVPNARCLDLFAGSG 71
           ++A  G++RII G  R  +L V +  GLRPT +RV+ETLFNWLA  +  ARCLDL AG+G
Sbjct: 5   RRAAPGRIRIIGGSLRNSRLEVPNLPGLRPTAERVRETLFNWLAPVIDGARCLDLCAGTG 64

Query: 72  GLGFECASRQANQVTMLELNPLAFQQLKTNVQSLKAENIELIHTDALAFLRQSGKPYDVV 131
            LG E  SR A  V  +E +  A Q L+ N+  LKA+  ++   +A AFLR + +P DVV
Sbjct: 65  ALGIEALSRGAAAVQFVERDARAAQALRANLARLKADGGQVAALEAEAFLRGTAQPCDVV 124

Query: 132 FIDPPFRQGLLQETTQLLEQNGWLAPQAMIYIECEKELPLTELPPHWHLHREKSAGQVCY 191
           F+DPPF   L     + LEQ GWLA +A IY+E  +  P   LPP+W LHRE  AG+V +
Sbjct: 125 FLDPPFALELWPALARQLEQGGWLAARAWIYVESPRG-PAPALPPNWQLHREGQAGEVRF 183

Query: 192 RLFIR 196
            L+ R
Sbjct: 184 ALYRR 188