Pairwise Alignments

Query, 199 a.a., 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD from Vibrio cholerae E7946 ATCC 55056

Subject, 243 a.a., methyltransferase small (RefSeq) from Shewanella loihica PV-4

 Score = 40.8 bits (94), Expect = 2e-08
 Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 5/79 (6%)

Query: 64  LDLFAGSGGLGFECASRQANQVTMLELNPLAFQQLKTNV-QSLKAENIELIHTDALAFL- 121
           LD+ AGSG L    A R    +  LE++PLA Q  + N+ QS  ++ I LI  D L +  
Sbjct: 39  LDIGAGSGLLSLMAAQRSEAVIQALEIDPLAAQDCQHNIDQSPWSDRITLIQADLLQWYP 98

Query: 122 ---RQSGKPYDVVFIDPPF 137
               Q+   +D +  +PP+
Sbjct: 99  LAQTQAQTQFDHILCNPPY 117