Pairwise Alignments

Query, 199 a.a., 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD from Vibrio cholerae E7946 ATCC 55056

Subject, 202 a.a., RNA methyltransferase, RsmD family from Dechlorosoma suillum PS

 Score =  153 bits (386), Expect = 2e-42
 Identities = 86/187 (45%), Positives = 111/187 (59%), Gaps = 5/187 (2%)

Query: 10  SQKKAPTGQVRIISGLWRGRKLPVHDAEGLRPTTDRVKETLFNWLAQEVPNARCLDLFAG 69
           ++ +A    VRII G WR R L   D EGLRPT DRV+ETLFNWL Q++    CLDLFAG
Sbjct: 15  ARARAGNNVVRIIGGEWRRRVLSFPDGEGLRPTPDRVRETLFNWLGQDLTGWNCLDLFAG 74

Query: 70  SGGLGFECASRQANQVTMLELNPLAFQQLKTNVQSLKAENIELIHTDALAFLRQSGKPYD 129
           SG LGFE ASR A +  ++E +P AF  LK N   L+ EN+++I  DAL F+  +   +D
Sbjct: 75  SGALGFEAASRGAARSVLVERSPKAFAALKDNAALLQGENLQIIREDALKFVASTELRFD 134

Query: 130 VVFIDPPFRQGLLQETTQLLEQNGWLAPQAMIYIECEKELPLTELPPHWHLHREKSAGQV 189
           +VF+DPP+  G L++   LL +   L    +IY E EK L   E    W   +   AGQV
Sbjct: 135 LVFLDPPYHLGWLEKLEPLLSR--VLKEDGVIYAEAEKPL---ESLGDWATVKRGKAGQV 189

Query: 190 CYRLFIR 196
            Y L  R
Sbjct: 190 FYHLMAR 196