Pairwise Alignments

Query, 199 a.a., 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD from Vibrio cholerae E7946 ATCC 55056

Subject, 190 a.a., methyltransferase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  105 bits (261), Expect = 7e-28
 Identities = 64/159 (40%), Positives = 87/159 (54%), Gaps = 6/159 (3%)

Query: 19  VRIISGLWRGRKLPVHDAEGLRPTTDRVKETLFNWLAQEV---PNARCLDLFAGSGGLGF 75
           +RII+G + GR L   +  G RP   RV+E LF+ L       P  R LDLFAGSG L F
Sbjct: 1   MRIIAGEYGGRVLKTAEGPGYRPAMSRVREALFSMLESRGVVWPGLRVLDLFAGSGSLAF 60

Query: 76  ECASRQANQVTMLELNPLAFQQLKTNVQSL--KAENIELIHTDALAFL-RQSGKPYDVVF 132
           E  SR A +   +E  P A + ++ N Q+L    E  +++  D    L R+S   +DVVF
Sbjct: 61  EALSRGAAEAWFVETAPKAAELIRKNAQTLGIAQERWQVVQEDCNKLLARRSRTTFDVVF 120

Query: 133 IDPPFRQGLLQETTQLLEQNGWLAPQAMIYIECEKELPL 171
           IDPP+  G L  T +   +NGWLA   ++ +E E  LPL
Sbjct: 121 IDPPYGAGQLSPTLRNAVRNGWLADGGIVAVEVEARLPL 159