Pairwise Alignments

Query, 199 a.a., 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD from Vibrio cholerae E7946 ATCC 55056

Subject, 200 a.a., class I SAM-dependent methyltransferase from Methanococcus maripaludis S2

 Score = 43.1 bits (100), Expect = 3e-09
 Identities = 44/152 (28%), Positives = 71/152 (46%), Gaps = 22/152 (14%)

Query: 22  ISGLWRGRKLPVHDAEGLRPTTDRVKETLFNWLAQEVPNAR---CLDLFAGSGGLGFECA 78
           ISG+ RG++       G+       K T+   L +E+  ++    LD+  G G +G   A
Sbjct: 17  ISGMLRGKRFSFKTDSGVFSPKKIDKGTII--LVEELELSKDDDVLDVGCGYGVIGISIA 74

Query: 79  SRQANQVTMLELNP----LAFQQLKTNVQSLKAENIELIHTDALAFLRQSGKPYDVVFID 134
             + N VTM +LN     L  + +K N +S K  NIE+   D   F + + K Y V+  +
Sbjct: 75  D-EVNSVTMTDLNNRSVGLTRKNIKLNGKSEK--NIEVFQGDL--FEKVNNKKYSVIISN 129

Query: 135 PPFRQG------LLQETTQLLEQNG--WLAPQ 158
           PP + G      ++ +   LL +NG  W+  Q
Sbjct: 130 PPIKAGKELIHKIISKGHNLLNENGSIWVVIQ 161