Pairwise Alignments

Query, 199 a.a., 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD from Vibrio cholerae E7946 ATCC 55056

Subject, 216 a.a., conserved hypothetical protein from Marinobacter adhaerens HP15

 Score =  190 bits (483), Expect = 1e-53
 Identities = 94/191 (49%), Positives = 128/191 (67%), Gaps = 1/191 (0%)

Query: 5   RQPNPSQKKAPTGQVRIISGLWRGRKLPVHDAEGLRPTTDRVKETLFNWLAQEVPNARCL 64
           R+  P+ K + TG++RII G WR RKL   DA G+RPT  R +ETLFNWLA  +  + CL
Sbjct: 19  REAAPAGKGSGTGELRIIGGDWRSRKLRFPDAGGVRPTPARTRETLFNWLAFHLAGSDCL 78

Query: 65  DLFAGSGGLGFECASRQANQVTMLELNPLAFQQLKTNVQSLKAENIELIHTDALAFLRQS 124
           DLFAGSG LG E  SR A Q T+++  P   + L+ N++ LK++N E++ +D  ++L Q 
Sbjct: 79  DLFAGSGALGLEALSRGAGQATLVDHTPALARALRDNLRLLKSDNGEVVCSDVESYLAQR 138

Query: 125 GK-PYDVVFIDPPFRQGLLQETTQLLEQNGWLAPQAMIYIECEKELPLTELPPHWHLHRE 183
            + P+D+VF+DPPFRQG L++   LLEQ  W+ P   +Y+E E ELP   +P  W LHR+
Sbjct: 139 NRPPFDIVFMDPPFRQGWLEKLFPLLEQQAWIKPGGWVYMEHESELPPPSVPVSWQLHRQ 198

Query: 184 KSAGQVCYRLF 194
           KSAGQV Y LF
Sbjct: 199 KSAGQVTYSLF 209