Pairwise Alignments

Query, 199 a.a., 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD from Vibrio cholerae E7946 ATCC 55056

Subject, 711 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 45.4 bits (106), Expect = 2e-09
 Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 2/85 (2%)

Query: 54  LAQEVPNARCLDLFAGSGGLGFECASRQANQVTMLELNPLAFQQLKTN--VQSLKAENIE 111
           + Q+    R L+LF+ +G      A   A  VT ++++       K N  + +L  +  E
Sbjct: 540 VGQKSKGRRVLNLFSYTGSASVHAALGGAKSVTTVDMSNTYLAWAKENFALNNLSGKQYE 599

Query: 112 LIHTDALAFLRQSGKPYDVVFIDPP 136
            +  D L ++R   + YD++FIDPP
Sbjct: 600 FVQADCLQWIRDCNEQYDLIFIDPP 624