Pairwise Alignments

Query, 199 a.a., 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD from Vibrio cholerae E7946 ATCC 55056

Subject, 200 a.a., Ribosomal RNA small subunit methyltransferase D from Enterobacter sp. TBS_079

 Score =  231 bits (590), Expect = 5e-66
 Identities = 113/195 (57%), Positives = 142/195 (72%), Gaps = 4/195 (2%)

Query: 5   RQPNPSQKKAPTGQVRIISGLWRGRKLPVHDAEGLRPTTDRVKETLFNWLAQEVPNARCL 64
           ++PN    +AP GQ+RII G WRGRKLPV D+ GLRPTTDRV+ETLFNWLA  + +A CL
Sbjct: 2   KKPN----RAPAGQIRIIGGQWRGRKLPVPDSPGLRPTTDRVRETLFNWLAPSMVDAHCL 57

Query: 65  DLFAGSGGLGFECASRQANQVTMLELNPLAFQQLKTNVQSLKAENIELIHTDALAFLRQS 124
           D FAGSG LG E  SR A   T+LE+     Q L+ N+ +LKA N ++++T+ L+FL Q 
Sbjct: 58  DCFAGSGALGLEALSRYAASATLLEMERGVAQTLQQNLATLKATNAKVVNTNTLSFLAQK 117

Query: 125 GKPYDVVFIDPPFRQGLLQETTQLLEQNGWLAPQAMIYIECEKELPLTELPPHWHLHREK 184
           G P++VVF+DPPFR+GLL+ET  LLE NGWLA  A+IY+E E E  L  +P HW LHREK
Sbjct: 118 GTPHNVVFVDPPFRKGLLEETLSLLENNGWLADDALIYVESEVENGLPPVPVHWDLHREK 177

Query: 185 SAGQVCYRLFIREEQ 199
            AGQV YRL+ R+ Q
Sbjct: 178 VAGQVAYRLYHRQAQ 192