Pairwise Alignments

Query, 199 a.a., 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD from Vibrio cholerae E7946 ATCC 55056

Subject, 375 a.a., 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC from Enterobacter sp. TBS_079

 Score = 40.4 bits (93), Expect = 4e-08
 Identities = 27/104 (25%), Positives = 47/104 (45%), Gaps = 5/104 (4%)

Query: 65  DLFAGSGGLGFECASRQANQVTMLELNPLAFQQLKTNVQSLKAENIELIHTDALAFLRQS 124
           DLF G GG G  CA+    Q+T +E++  A    + +   L    +     D+  F    
Sbjct: 239 DLFCGVGGFGLHCATPDM-QLTGIEISAEAIACARQSAAELGLTRLHFQALDSTQFATGQ 297

Query: 125 GKPYDVVFIDPPFRQGLLQETTQLLEQNGWLAPQAMIYIECEKE 168
               ++V ++PP R+G+ +     L Q   +AP  ++Y  C  +
Sbjct: 298 DNVPELVLVNPP-RRGIGKALCDYLSQ---MAPDYIVYSSCNAQ 337