Pairwise Alignments

Query, 199 a.a., 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD from Vibrio cholerae E7946 ATCC 55056

Subject, 190 a.a., methyltransferase, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  102 bits (255), Expect = 3e-27
 Identities = 62/157 (39%), Positives = 90/157 (57%), Gaps = 6/157 (3%)

Query: 19  VRIISGLWRGRKLPVHDAEGLRPTTDRVKETLFNWLAQEV---PNARCLDLFAGSGGLGF 75
           +RII+G + GR L   +  G RP   RV+E+LF+ L+        +R LDLFAGSG L F
Sbjct: 1   MRIIAGAYGGRLLKTVEGPGYRPAMSRVRESLFSMLSSRGVVWAGSRVLDLFAGSGSLAF 60

Query: 76  ECASRQANQVTMLELNPLAFQQLKTNVQSLKAE--NIELIHTDALAFL-RQSGKPYDVVF 132
           E  SR A++   +ELN  A   ++ N  SL  E     ++  D    L R++  P+DVVF
Sbjct: 61  EALSRGADEAWFVELNAKAAACIEKNATSLGIEPQRWRVLAEDITKVLGRRAAAPFDVVF 120

Query: 133 IDPPFRQGLLQETTQLLEQNGWLAPQAMIYIECEKEL 169
           IDPP+ +G L  T +L+ ++ WLAP+ ++  E E  L
Sbjct: 121 IDPPYGEGRLAPTIRLMMRSRWLAPEGVVVAEVEAGL 157