Pairwise Alignments

Query, 199 a.a., 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD from Vibrio cholerae E7946 ATCC 55056

Subject, 188 a.a., methyltransferase from Caulobacter crescentus NA1000

 Score =  101 bits (251), Expect = 1e-26
 Identities = 54/155 (34%), Positives = 88/155 (56%), Gaps = 9/155 (5%)

Query: 19  VRIISGLWRGRKLPVHDAEGLRPTTDRVKETLFNWL-----AQEVPNARCLDLFAGSGGL 73
           +RI+SG +RG+ +     +  RPT+DR ++ +FN L     A E+  AR +D+FAGSG L
Sbjct: 1   MRIVSGQFRGKAIAAPPGDATRPTSDRARQAVFNILEHAAWAPELHGARVIDVFAGSGAL 60

Query: 74  GFECASRQANQVTMLELNPLAFQQLKTNVQSLKAENIELIH----TDALAFLRQSGKPYD 129
           G E  SR A+    +E +  A   ++ N+ ++    +  +H    TD       +G P+D
Sbjct: 61  GLEALSRGASFCLFVETDDAARGAIRENIDAMHLFGVTRVHRRDATDLGPRPASAGAPFD 120

Query: 130 VVFIDPPFRQGLLQETTQLLEQNGWLAPQAMIYIE 164
           +VF+DPP+ +GL ++    L  +GWLAP A++  E
Sbjct: 121 IVFLDPPYAKGLGEKAVAELRTHGWLAPGAILMFE 155