Pairwise Alignments

Query, 199 a.a., 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD from Vibrio cholerae E7946 ATCC 55056

Subject, 218 a.a., 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD from Ralstonia sp. UNC404CL21Col

 Score =  126 bits (317), Expect = 3e-34
 Identities = 83/208 (39%), Positives = 115/208 (55%), Gaps = 29/208 (13%)

Query: 10  SQKKAPTGQVRIISGLWRGRKLPVHDAEGLRPTTDRVKETLFNWLAQEVPNARCLDLFAG 69
           S  +AP  QVRII G ++   LPV DA+GLRPT+DRV+ET+FNWL Q++   RC D+FAG
Sbjct: 18  SHARAPQ-QVRIIGGQYKRTPLPVVDADGLRPTSDRVRETVFNWLGQDLTGWRCADIFAG 76

Query: 70  SGGLGFECASRQANQVTMLELNPLAFQQLKTNVQSLKAENIELIHTDALAFL-RQSGKPY 128
           +G LGFE ASR A  VT++E +  A + L      L A  ++++  DA A+L RQ     
Sbjct: 77  TGALGFEAASRGAAHVTLIENHAPAVRALHAIRDKLGARMVDIVSGDAFAWLARQPDAAL 136

Query: 129 DVVFIDPPFRQG----LLQETTQLLEQNGWLAPQAMIYIECEKELPLTE----------- 173
           D VFIDPPF Q      L+  T++++      P  +IY+E  +  PL +           
Sbjct: 137 DAVFIDPPFAQDWTLRALEAATRVVK------PGGVIYVEAAQ--PLVDVSADSHDAEPA 188

Query: 174 ----LPPHWHLHREKSAGQVCYRLFIRE 197
               LP    LH+   AG V   L +R+
Sbjct: 189 AGLALPADLVLHKHLRAGAVHAHLLLRK 216