Pairwise Alignments

Query, 199 a.a., 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD from Vibrio cholerae E7946 ATCC 55056

Subject, 713 a.a., 23S rRNA m(2)G2445 methyltransferase (RefSeq) from Shewanella sp. ANA-3

 Score = 40.4 bits (93), Expect = 8e-08
 Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 6/89 (6%)

Query: 54  LAQEVPNARCLDLFAGSGGLGFECASRQANQVTMLELNPLAFQQLKTN--VQSLKAENIE 111
           + Q+    R L+LF+ +G      A   A  VT ++++       K N  +  L  +  E
Sbjct: 540 VGQKSKGRRVLNLFSYTGSASVHAALGGAKSVTTVDMSNTYLAWAKENFALNDLSGKQYE 599

Query: 112 LIHTDALAFLRQSGKP----YDVVFIDPP 136
            +  D L ++R S       YD++FIDPP
Sbjct: 600 FVQADCLQWIRDSAHDKSAQYDLIFIDPP 628