Pairwise Alignments

Query, 408 a.a., EAL domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 730 a.a., PAS:GGDEF from Pseudomonas syringae pv. syringae B728a

 Score = 43.5 bits (101), Expect = 2e-08
 Identities = 54/186 (29%), Positives = 78/186 (41%), Gaps = 21/186 (11%)

Query: 46  LIVENFLSLGTN--PRIARSRCFINFPHKSL-IRRLPLTLPREQIVVEILETCQPTDDLF 102
           LI EN   +G N  PR      FI    +SL + +LP ++ + +I   I+   Q  DD  
Sbjct: 550 LIPENRFLMGVNISPRQFLQHDFIERVERSLTLHQLPASMLKLEITEGIV--IQNLDDTI 607

Query: 103 EAVQELSQRGYLLALDDF---VYSPAWERFLPYVQIVKIDIM----AMGLDKACEFVRG- 154
             +  L   G   A+DDF     S  + + LP V  +KID      A       E +R  
Sbjct: 608 LKMLSLKALGVSFAMDDFGTGYSSLTYLKRLP-VDTLKIDQSFVQDATNDPNDAEIIRAI 666

Query: 155 -RLAQGSRRRFLAERVETEDEFHQARHAGFTFFQGYFFSKPEIIKQRYVSPEHVIAMQLF 213
             +AQ      +AE VET ++       G   +QGY FS+P         P+    ++L 
Sbjct: 667 VAMAQSLNLNVIAEGVETSEQLAFLEKVGCYTYQGYLFSEP------LPGPQFESLLELK 720

Query: 214 REVCQP 219
           R   QP
Sbjct: 721 RPAQQP 726