Pairwise Alignments

Query, 408 a.a., EAL domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 412 a.a., diguanylate phosphodiesterase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  188 bits (477), Expect = 3e-52
 Identities = 133/407 (32%), Positives = 202/407 (49%), Gaps = 12/407 (2%)

Query: 3   TTYVARQPILNAKRHTLGYELLFRDGEKNAFPEYMDADRATYRLIVENFLSLGTNPRIAR 62
           T ++ARQPI +A     G+ELLFRD          D D AT  +I + + ++ +      
Sbjct: 11  TIFIARQPIFDATGTLWGHELLFRDSPSGP-ARIDDPDAATASVIADGY-AIASETIPGT 68

Query: 63  SRCFINFPHKSLIRRLPLTLPREQIVVEILETCQPTDDLFEAVQELSQRGYLLALDDFVY 122
           +   INFP   L+      LP ++ + EILET QPT +L +A+  L + GY LA+DDFV 
Sbjct: 69  TPFLINFPEGLLLSGAAEVLPPDRCIPEILETVQPTPELVDALHTLKRAGYRLAVDDFVG 128

Query: 123 SPAWERFLPYVQIVKIDIMAMGLDKACEFVRGRLAQGSRRRFLAERVETEDEFHQARHAG 182
               +  L    I+K+D++ +        +   L +      LAE+VET   F Q R  G
Sbjct: 129 QDQAQPLLGLADIIKVDVLGVP-PAELPALTATLRKRHHAVLLAEKVETAAMFGQCRMLG 187

Query: 183 FTFFQGYFFSKPEIIKQRYVSPEHVIAMQLFREVCQPEVDYVRVERLVAQDIALSYKLLR 242
           +T FQGY F++P I+  R +S      + L + +   E D  ++ R V  D  L+Y+LLR
Sbjct: 188 YTLFQGYHFARPVIVPGRTLSSGQTSRLHLMQSLA-GEADPHKLVRAVTVDPGLTYRLLR 246

Query: 243 FVNTMSDRISVSISSFRQALVYLGQDKLRIF-VSLAVASYISSKKPKELYNLSLQRAQF- 300
           ++N+    +   ++S + A   LG + LR + + + +A    S  P E+  L++ RA+F 
Sbjct: 247 YINSAWFALLKEVTSVQHAASLLGFETLRKWLLVITLADTAGSAAPPEVMRLAVTRARFL 306

Query: 301 ---CQLMATHTHFKAHREQAFLIGMFSVLDALLDTSIEQLVEQLPLADDVKLALREREGP 357
              C L+ T TH     E  FL+G+ S LDALL   +  L+  LPL  D + AL     P
Sbjct: 307 ELLCGLVRTCTHAP---ESMFLLGLLSQLDALLGIPMPVLLAHLPLDADFRAALSGEPSP 363

Query: 358 LGTLLDLEECFEKADWQGVEQHCLELGFDLEDVRQELIEAQRWSQDI 404
           +   L L    E+  W        +LGF   DV +  I+AQ W+  I
Sbjct: 364 MHDELHLAVLLERGAWDEALPLMTKLGFSPMDVARSSIDAQMWASRI 410