Pairwise Alignments

Query, 408 a.a., EAL domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 266 a.a., hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 47.4 bits (111), Expect = 5e-10
 Identities = 41/159 (25%), Positives = 82/159 (51%), Gaps = 22/159 (13%)

Query: 192 SKPEIIKQRYVS-PEHVIAMQLFREVCQPEVDYVRVERLVAQDIALSYKLLRFVNTMS-D 249
           + P++I ++ +  P  V+  +L R++  P+ D   +  L+ QD  LS ++L+  N+ +  
Sbjct: 9   ASPQLIAEKVLKLPSKVL--ELDRKLADPQFDTKDLLALIEQDPLLSVEVLKLCNSPAFK 66

Query: 250 RISVSISSFRQALVYLGQDKLRIFVSLAVASYISSKKP-------KELYNLSLQRAQFCQ 302
           R    ++S +QALV LG+++LR FV+ ++   +   KP        E++  S+Q A    
Sbjct: 67  RGEREVTSLQQALVQLGREQLRRFVTSSLVREMLDIKPIYFRRFGAEIWRHSMQVAFLAS 126

Query: 303 LMATHTHFKAHREQAFLIGM------FSVLDALLDTSIE 335
            ++     +  R+ AFL+G+       ++   LLD  ++
Sbjct: 127 ELS-----EEDRDTAFLLGLLHDVGKLAIFKMLLDAFVQ 160