Pairwise Alignments

Query, 205 a.a., homoserine/homoserine lactone efflux protein from Vibrio cholerae E7946 ATCC 55056

Subject, 209 a.a., Homoserine/homoserine lactone efflux protein from Pseudomonas fluorescens FW300-N2E2

 Score =  102 bits (253), Expect = 7e-27
 Identities = 64/205 (31%), Positives = 100/205 (48%), Gaps = 12/205 (5%)

Query: 1   MDIHVWLAYLLTAVVFSLAPGSGTVNSISNGLSYGTRHSLGAIIGLQIGLACHIVLVGIG 60
           M++  WL +   A+V  L PG  ++  I N L+YG R S  A +G  I   C +    +G
Sbjct: 1   MNLETWLLFSGAALVVILIPGPLSLLMIGNSLNYGLRRSYPAFLGGVIASICLLSASALG 60

Query: 61  IGALVAQSALAFTLIKWIGAAYLVWLGIQKW-RDRAPLTATTTSHELSQA-------ALL 112
           +GAL+  S   F+ +K +GA YL +L  Q W + R P    +   E+ QA       AL 
Sbjct: 61  LGALLMASEQLFSALKIVGALYLFYLAWQSWQQSRQP----SQGAEVPQAAAVPRFGALF 116

Query: 113 RKAVLINLTNPKSIVFLVALFPQFIDPTRDHWPQFLVLGITTVTIDAIVMFGYTALAAQL 172
            +A ++  +NPK I+F  A  PQF+   +   PQ L++  T   +D +    Y   A   
Sbjct: 117 GRAFVLGASNPKDILFFAAFLPQFLSAEQAFLPQLLIMIATWTVLDLLCKLAYGLGAHGA 176

Query: 173 GRYIRSPNIMTRMNKLFGSMFMGCG 197
            RY+R+    +  N++   +F G G
Sbjct: 177 ARYLRTGKGQSWFNRISAGLFGGAG 201