Pairwise Alignments

Query, 205 a.a., homoserine/homoserine lactone efflux protein from Vibrio cholerae E7946 ATCC 55056

Subject, 204 a.a., RhtB family transporter from Pseudomonas fluorescens FW300-N2E2

 Score = 97.4 bits (241), Expect = 2e-25
 Identities = 54/190 (28%), Positives = 100/190 (52%), Gaps = 2/190 (1%)

Query: 7   LAYLLTAVVFSLAPGSGTVNSISNGLSYGTRHSLGAIIGLQIGLACHIVLVGIGIGALVA 66
           L + +T+++ + +PG+G V +++ GL+ G R S+ A +   +G+  H++    G+ AL+ 
Sbjct: 3   LEFFITSLIVAASPGTGVVYTVAAGLARGWRASVVAALSCTLGIVPHMLAAITGLAALLH 62

Query: 67  QSALAFTLIKWIGAAYLVWLGIQKWRDRAPLTATTTSHELSQAALLRKAVLINLTNPKSI 126
            S  AF +I ++G AYL+W+     +    L         S  A++   +L+NL NPK  
Sbjct: 63  TSPPAFEIITYLGVAYLLWMAWSTLQSHGALHIDPHKTPRSNGAVIFSGILVNLLNPKLS 122

Query: 127 VFLVALFPQFIDP-TRDHWPQFLVLGITTVTIDAIVMFGYTALAAQLGRYI-RSPNIMTR 184
           +F +A  PQF+ P   D   + L L    + I  +V   Y  L A + R++   P+++  
Sbjct: 123 IFFLAFLPQFLAPGETDAMWRMLQLSFIFMAITLVVFVIYGVLCASMRRHVLERPSVLQW 182

Query: 185 MNKLFGSMFM 194
           + +LF + F+
Sbjct: 183 IRRLFSAAFV 192