Pairwise Alignments

Query, 205 a.a., homoserine/homoserine lactone efflux protein from Vibrio cholerae E7946 ATCC 55056

Subject, 206 a.a., Putative threonine efflux protein from Pseudomonas fluorescens FW300-N2E2

 Score = 95.5 bits (236), Expect = 6e-25
 Identities = 63/203 (31%), Positives = 96/203 (47%), Gaps = 7/203 (3%)

Query: 1   MDIHVWLAYLLTAVVFSLAPGSGTVNSISNGLSYGTRHSLGAIIGLQIGLACHIVLVGIG 60
           M++     ++      ++APG   + SISN   YG   +    IG  +  A  I L  +G
Sbjct: 1   MELSTLAVFIPACFALNMAPGPNNLLSISNASRYGFVRACSGGIGRLLAFAIMIALAAVG 60

Query: 61  IGALVAQSALAFTLIKWIGAAYLVWLGIQKWRDRAPLTATTTSHELSQAALLRKAVLINL 120
           + A++  S L F  IK +GA YL +L +Q WR +    +      +S+A L R+  L+ +
Sbjct: 61  LTAVLHTSELLFLGIKLVGAGYLFYLAVQLWRAQPEAGSEAMVASMSRAGLARQEFLVAI 120

Query: 121 TNPKSIVFLVALFPQFIDPTRDHWPQFLVLGITTVTIDAIVMFGYTALAAQLGRYIRSPN 180
            NPK+I+   A  PQF+D T     QF VLG   + ++ I +     L   +G Y R   
Sbjct: 121 GNPKAILLFTAFLPQFVDRTGAVTQQFAVLGGLFLALECIAI----GLYCYMGIYARRLF 176

Query: 181 IMTRMNKLFGSMFMGCGMLLATA 203
                 +LF  M   C  LLA+A
Sbjct: 177 ARPSGKRLFNRM---CAGLLASA 196