Pairwise Alignments

Query, 205 a.a., homoserine/homoserine lactone efflux protein from Vibrio cholerae E7946 ATCC 55056

Subject, 210 a.a., Homoserine/homoserine lactone efflux protein from Pseudomonas fluorescens FW300-N2E2

 Score =  172 bits (435), Expect = 5e-48
 Identities = 88/206 (42%), Positives = 133/206 (64%), Gaps = 2/206 (0%)

Query: 1   MDIHVWLAYLLTAVVFSLAPGSGTVNSISNGLSYGTRHSLGAIIGLQIGLACHIVLVGIG 60
           M +  WLA+     V SL+PG+G + S+S+GL YG        +GLQ+GLA  IV+V  G
Sbjct: 1   MVLETWLAFFAACWVISLSPGAGAIASMSSGLRYGFWRGYWNALGLQLGLALQIVIVAAG 60

Query: 61  IGALVAQSALAFTLIKWIGAAYLVWLGIQKWRD-RAPLTATTTSHEL-SQAALLRKAVLI 118
           +GA++  SA AF  IKW G AYLV+LGI++WR     ++  +    + +  AL+ +  L+
Sbjct: 61  VGAILTASATAFYAIKWFGVAYLVYLGIKQWRAIPGDISDDSVVRPIGNPLALVFRGFLV 120

Query: 119 NLTNPKSIVFLVALFPQFIDPTRDHWPQFLVLGITTVTIDAIVMFGYTALAAQLGRYIRS 178
           N++NPK++VF++A+ PQFI+P      Q+L+LG+T V +D IVM GYT LA+++ R +R+
Sbjct: 121 NISNPKALVFMLAVLPQFINPHAPLIQQYLILGVTMVVVDLIVMAGYTGLASKVLRLLRT 180

Query: 179 PNIMTRMNKLFGSMFMGCGMLLATAK 204
           P    RMN+ F  +F+G   LLAT +
Sbjct: 181 PKQQRRMNRTFAGLFIGAAGLLATIR 206