Pairwise Alignments

Query, 205 a.a., homoserine/homoserine lactone efflux protein from Vibrio cholerae E7946 ATCC 55056

Subject, 213 a.a., transporter, LysE family from Pseudomonas fluorescens FW300-N2E2

 Score =  122 bits (307), Expect = 4e-33
 Identities = 69/202 (34%), Positives = 113/202 (55%), Gaps = 5/202 (2%)

Query: 1   MDIHVWLAYLLTAVVFSLAPGSGTVNSISNGLSYGTRHSLGAIIGLQIGLACHIVLVGIG 60
           M++H  LA+ L A +   +PG  T+ +I+N L+YG R+++ + +G   GL C      +G
Sbjct: 1   MELHSILAFTLVAAIAIASPGPATLMAINNSLAYGPRYAVWSSVGNASGLFCLSAAAMLG 60

Query: 61  IGALVAQSALAFTLIKWIGAAYLVWLGIQKWRDRAPLTATTT-----SHELSQAALLRKA 115
           +GAL+A S   F  +K +GA YL +LG ++   + P+ A        + + S++ L + A
Sbjct: 61  LGALLASSEWLFNAVKVLGAGYLFYLGARQLFKKTPILAQDVQADGKTSKPSRSKLYKSA 120

Query: 116 VLINLTNPKSIVFLVALFPQFIDPTRDHWPQFLVLGITTVTIDAIVMFGYTALAAQLGRY 175
            L  +TNPK+ +F  ALFPQFID +    PQFL+L      +  + +  Y A+AAQ    
Sbjct: 121 FLTAITNPKATMFFTALFPQFIDQSAPLLPQFLLLTSIFAGLSLVSLSLYAAIAAQAQGV 180

Query: 176 IRSPNIMTRMNKLFGSMFMGCG 197
           ++ P     +++L GS F+G G
Sbjct: 181 LKRPAFSVWISRLVGSTFIGFG 202