Pairwise Alignments

Query, 205 a.a., homoserine/homoserine lactone efflux protein from Vibrio cholerae E7946 ATCC 55056

Subject, 202 a.a., probable transporter, LysE family from Pseudomonas fluorescens FW300-N2E2

 Score =  112 bits (281), Expect = 4e-30
 Identities = 70/198 (35%), Positives = 110/198 (55%), Gaps = 7/198 (3%)

Query: 9   YLLTAVVFSLAPGSGTVNSISNGLSYGTRHSLGAIIGLQIGLACHIVLVGIGIGALVAQS 68
           +L+ A +  L+PG G + +ISN L +G R +L  I G+  G      +    +G ++A S
Sbjct: 7   FLILATLTVLSPGPGVMLTISNALRHGWRGALPGIFGIASGAFIVAGICASSLGLILAAS 66

Query: 69  ALAFTLIKWIGAAYLVWLGIQKWRDR---APLTATTTSHELSQAALLRKAVLINLTNPKS 125
           A AFTL+K+IGA YL++LGI+ WR +     LT T+T           +A+ I L NPK+
Sbjct: 67  ATAFTLLKYIGALYLLYLGIKMWRTQRFVPELTVTST----RPWRRFGEALSIQLLNPKA 122

Query: 126 IVFLVALFPQFIDPTRDHWPQFLVLGITTVTIDAIVMFGYTALAAQLGRYIRSPNIMTRM 185
             F +A+FPQFI P   ++ QF +L ++   +  +V  GY  +A     ++ S      +
Sbjct: 123 GFFFLAVFPQFIKPLDHYYSQFFLLVLSYSVLVVLVHSGYALMANGARGWLSSSQGARIV 182

Query: 186 NKLFGSMFMGCGMLLATA 203
            KL G  F+G G+L+A+A
Sbjct: 183 GKLSGITFLGFGVLMASA 200