Pairwise Alignments

Query, 205 a.a., homoserine/homoserine lactone efflux protein from Vibrio cholerae E7946 ATCC 55056

Subject, 235 a.a., transporter, LysE family from Pseudomonas fluorescens FW300-N1B4

 Score = 94.4 bits (233), Expect = 2e-24
 Identities = 54/152 (35%), Positives = 77/152 (50%)

Query: 18  LAPGSGTVNSISNGLSYGTRHSLGAIIGLQIGLACHIVLVGIGIGALVAQSALAFTLIKW 77
           +APG   + S+SN   YG R +  A +G  +  A  I L   G+  ++  S   F  IK 
Sbjct: 1   MAPGPNNLLSVSNATRYGYRRACVAGVGRLLAFAGMIALAAAGLSVVLKTSEWLFYAIKI 60

Query: 78  IGAAYLVWLGIQKWRDRAPLTATTTSHELSQAALLRKAVLINLTNPKSIVFLVALFPQFI 137
           IGAAYL++L  Q WR         T   +   AL R+  L+   NPK+I+   A  PQF+
Sbjct: 61  IGAAYLLYLAWQLWRANPEAEQLVTGAPIGIVALARQEFLVAAGNPKAILLFTAFLPQFV 120

Query: 138 DPTRDHWPQFLVLGITTVTIDAIVMFGYTALA 169
           DPTR    QF+VLG   + ++ I +  Y  +A
Sbjct: 121 DPTRPIAAQFVVLGALFLLLEWIAISAYAYMA 152