Pairwise Alignments

Query, 205 a.a., homoserine/homoserine lactone efflux protein from Vibrio cholerae E7946 ATCC 55056

Subject, 208 a.a., Homoserine/homoserine lactone efflux protein from Pseudomonas fluorescens FW300-N1B4

 Score =  108 bits (269), Expect = 9e-29
 Identities = 68/205 (33%), Positives = 101/205 (49%), Gaps = 12/205 (5%)

Query: 1   MDIHVWLAYLLTAVVFSLAPGSGTVNSISNGLSYGTRHSLGAIIGLQIGLACHIVLVGIG 60
           M +  WL +   A+V  L PG  ++  ISN L+YG R S  A +G  I   C +    +G
Sbjct: 1   MSLETWLLFSGAALVVILIPGPLSLLMISNSLNYGLRRSYPAFLGGVIASICLLSASALG 60

Query: 61  IGALVAQSALAFTLIKWIGAAYLVWLGIQKW-RDRAPLTATTTSHELSQA-------ALL 112
           +GAL+  S   F+ +K +GA YL +L  Q W + R P    +   E+ QA       AL 
Sbjct: 61  LGALLLASEQLFSALKIVGALYLFYLAWQSWQQSRQP----SQGAEVPQAAPVPRFRALF 116

Query: 113 RKAVLINLTNPKSIVFLVALFPQFIDPTRDHWPQFLVLGITTVTIDAIVMFGYTALAAQL 172
            +A ++  +NPK I+F  A  PQF+   +   PQ LV+  T   +D +    Y   A   
Sbjct: 117 GRAFMLGASNPKDILFFAAFLPQFLSAEQPFLPQLLVMIATWTVLDLLCKLAYGLGAHGA 176

Query: 173 GRYIRSPNIMTRMNKLFGSMFMGCG 197
            RY+RS N  +  N++   +F G G
Sbjct: 177 ARYLRSGNGQSWFNRVSAGLFSGAG 201