Pairwise Alignments

Query, 205 a.a., homoserine/homoserine lactone efflux protein from Vibrio cholerae E7946 ATCC 55056

Subject, 210 a.a., Homoserine/homoserine lactone efflux protein from Pseudomonas fluorescens FW300-N1B4

 Score =  170 bits (430), Expect = 2e-47
 Identities = 85/206 (41%), Positives = 130/206 (63%), Gaps = 2/206 (0%)

Query: 1   MDIHVWLAYLLTAVVFSLAPGSGTVNSISNGLSYGTRHSLGAIIGLQIGLACHIVLVGIG 60
           M +  WLA+     V SL+PG+G + S+S+GL YG        +GLQ+GLA  I +V  G
Sbjct: 1   MVLQTWLAFFAACWVISLSPGAGAIASMSSGLRYGFWRGYWNALGLQLGLALQIAIVAAG 60

Query: 61  IGALVAQSALAFTLIKWIGAAYLVWLGIQKWRDRA-PLTATTTSHELSQA-ALLRKAVLI 118
           +GA++A SA AF  IKW G AYLV+L +++WR     +       ++ +  AL+ +  L+
Sbjct: 61  VGAILAASATAFYAIKWFGVAYLVYLAVKQWRALPNDMNDDAAIRQIGKPMALVFRGFLV 120

Query: 119 NLTNPKSIVFLVALFPQFIDPTRDHWPQFLVLGITTVTIDAIVMFGYTALAAQLGRYIRS 178
           N++NPK++VF++A+ PQFIDP      Q+L+LG+T + +D IVM GYT LAA++ R +R+
Sbjct: 121 NVSNPKALVFMLAVLPQFIDPHAPLVAQYLILGVTMICVDLIVMAGYTGLAAKVLRLLRT 180

Query: 179 PNIMTRMNKLFGSMFMGCGMLLATAK 204
           P    RMN+ F  +F+G    +AT +
Sbjct: 181 PKQQKRMNRTFAGLFIGAAAFMATLR 206