Pairwise Alignments

Query, 205 a.a., homoserine/homoserine lactone efflux protein from Vibrio cholerae E7946 ATCC 55056

Subject, 210 a.a., Putative threonine efflux protein from Pseudomonas stutzeri RCH2

 Score =  153 bits (386), Expect = 2e-42
 Identities = 80/206 (38%), Positives = 122/206 (59%), Gaps = 2/206 (0%)

Query: 1   MDIHVWLAYLLTAVVFSLAPGSGTVNSISNGLSYGTRHSLGAIIGLQIGLACHIVLVGIG 60
           M +  WLA+ +   V SL+PG+G + S+S GL YG        IGLQ+ L   I +V  G
Sbjct: 1   MSLETWLAFFVACWVISLSPGAGAIASMSCGLQYGFWRGYWNAIGLQLALVLQIAVVAAG 60

Query: 61  IGALVAQSALAFTLIKWIGAAYLVWLGIQKWRDR-APLTATTTSHELSQ-AALLRKAVLI 118
           +GA++A S LAF LIKW G  YL+WL  ++W+ +   L  +     + +  +L+ +  ++
Sbjct: 61  VGAVLATSELAFGLIKWFGVGYLLWLAWKQWQAQPQALDDSAAPRPIGRPLSLVLRGFVV 120

Query: 119 NLTNPKSIVFLVALFPQFIDPTRDHWPQFLVLGITTVTIDAIVMFGYTALAAQLGRYIRS 178
           N +NPK+IVF++A+ PQF+DP R    Q+  +  T V +D IVM  YT LAA++ R +R+
Sbjct: 121 NASNPKAIVFILAVLPQFLDPQRPLLLQYSEMAATMVVVDLIVMAAYTGLAAKVLRLLRT 180

Query: 179 PNIMTRMNKLFGSMFMGCGMLLATAK 204
           P     +N+ F + F G   LLAT +
Sbjct: 181 PRQQRLINRSFAAAFAGAAALLATVR 206