Pairwise Alignments

Query, 205 a.a., homoserine/homoserine lactone efflux protein from Vibrio cholerae E7946 ATCC 55056

Subject, 211 a.a., Putative threonine efflux protein from Pseudomonas stutzeri RCH2

 Score =  114 bits (285), Expect = 1e-30
 Identities = 69/203 (33%), Positives = 110/203 (54%), Gaps = 4/203 (1%)

Query: 6   WLAYLLTAVVFSLAPGSGTVNSISNGLSYGTRHSLGAIIGLQIGLACHIVLVGIGIGALV 65
           WL +   A+  +L+PG   +  IS  LS G R  + +  G+  G   H+    +GI A++
Sbjct: 7   WLVFFSAALALNLSPGPDLLYVISRTLSGGRRIGIISACGVCSGALVHVAFAALGISAIL 66

Query: 66  AQSALAFTLIKWIGAAYLVWLGIQKWRDRAPLTATT--TSHELSQAALLRKAVLINLTNP 123
           A SALAFT +K++GAAYL++LG Q  R     TA     +  +S     R+ VL++L NP
Sbjct: 67  ATSALAFTAVKYVGAAYLLYLGYQALRSAGSGTAPALKAAPRVSAWKAYRQGVLVDLLNP 126

Query: 124 KSIVFLVALFPQFIDPTRDHWP-QFLVLGITTVTIDAIVMFGYTALAAQLGRYIR-SPNI 181
           K+ +F +A  PQF+ P     P Q LVLG+  V +  IV      LAA+  + +R +P +
Sbjct: 127 KAAIFFMAFLPQFVRPEHGAVPLQLLVLGMLVVVVAIIVESALVLLAARATQTLRNNPAV 186

Query: 182 MTRMNKLFGSMFMGCGMLLATAK 204
              +++  GS+ +  G+ L  ++
Sbjct: 187 SQWLDRALGSVLIALGIRLGLSE 209