Pairwise Alignments

Query, 205 a.a., homoserine/homoserine lactone efflux protein from Vibrio cholerae E7946 ATCC 55056

Subject, 208 a.a., Putative threonine efflux protein from Pseudomonas stutzeri RCH2

 Score =  100 bits (250), Expect = 1e-26
 Identities = 65/204 (31%), Positives = 102/204 (50%), Gaps = 10/204 (4%)

Query: 1   MDIHVWLAYLLTAVVFSLAPGSGTVNSISNGLSYGTRHSLGAIIGLQIGLACHIVLVG-- 58
           M + +WL +   A+V  L PG  ++  ISN L+YG R S  A +G   G+   I L+   
Sbjct: 1   MTLEIWLLFAGAALVVILIPGPLSLLMISNSLNYGLRRSWPAFVG---GVTASIALLSAS 57

Query: 59  -IGIGALVAQSALAFTLIKWIGAAYLVWLGIQKWRD--RAPLTATTTSHELSQ--AALLR 113
            +G+GAL+  S   F+ +K +GA YL +L  Q W++  +AP      S  L+   + L  
Sbjct: 58  ALGLGALLMASERLFSALKLVGALYLFYLAWQSWQEARQAPAAREIESPALAPRFSRLFG 117

Query: 114 KAVLINLTNPKSIVFLVALFPQFIDPTRDHWPQFLVLGITTVTIDAIVMFGYTALAAQLG 173
           +A ++  +NPK I+F  A  PQF+   +   PQ LV+ +T   +D      Y   A    
Sbjct: 118 RAFILGGSNPKDILFFAAFLPQFLSAGQPLLPQLLVMVVTWAVLDLCCKLAYGLGAQGAA 177

Query: 174 RYIRSPNIMTRMNKLFGSMFMGCG 197
           RY+R+       N+   ++F G G
Sbjct: 178 RYLRTGKGHVWFNRTSAALFGGAG 201