Pairwise Alignments

Query, 205 a.a., homoserine/homoserine lactone efflux protein from Vibrio cholerae E7946 ATCC 55056

Subject, 211 a.a., amino acid efflux protein from Sinorhizobium meliloti 1021

 Score =  122 bits (306), Expect = 5e-33
 Identities = 75/209 (35%), Positives = 106/209 (50%), Gaps = 7/209 (3%)

Query: 1   MDIHVWLAYLLTAVVFSLAPGSGTVNSISNGLSYGTRHSLGAIIGLQIGLACHIVLVGIG 60
           M    W A+   + V    PG   +  IS  L +G + +   + G+ +G    +    +G
Sbjct: 1   MSFEHWFAFAAASAVLLAIPGPTILLVISYALGHGRKIAGATVAGVALGDFTAMTASMLG 60

Query: 61  IGALVAQSALAFTLIKWIGAAYLVWLGIQKWRDRAPL-----TATTTSHELSQAALLRKA 115
           +GAL+A SA  FT++KWIGAAYLVWLGI+ W  RAP+     +   TS       +    
Sbjct: 61  LGALLATSAAVFTVLKWIGAAYLVWLGIKLW--RAPVGNDSGSTVETSPAERPLRIFLHT 118

Query: 116 VLINLTNPKSIVFLVALFPQFIDPTRDHWPQFLVLGITTVTIDAIVMFGYTALAAQLGRY 175
             +   NPKSI+F VA  PQF+D +R  + Q  +   T + +  I    Y  LAA  G  
Sbjct: 119 YAVTALNPKSILFFVAFLPQFLDLSRPLFAQMAIFETTFLILATINAALYAWLAAAAGST 178

Query: 176 IRSPNIMTRMNKLFGSMFMGCGMLLATAK 204
           IR PNI   +N+L GS+ +G G L A  K
Sbjct: 179 IRKPNIRRIVNRLGGSLLIGAGFLTAGLK 207