Pairwise Alignments

Query, 205 a.a., homoserine/homoserine lactone efflux protein from Vibrio cholerae E7946 ATCC 55056

Subject, 202 a.a., LysE family translocator from Pseudomonas fluorescens SBW25-INTG

 Score =  111 bits (278), Expect = 8e-30
 Identities = 67/203 (33%), Positives = 110/203 (54%), Gaps = 8/203 (3%)

Query: 1   MDIHVWLAYLLTAVVFSLAPGSGTVNSISNGLSYGTRHSLGAIIGLQIGLACHIVLVGIG 60
           M    WL YL T    S+ PG   +  +++G  +G+R +L  I G  +G A  + L  +G
Sbjct: 1   MPFETWLLYLFTCCGISVVPGPNALLVLTHGALHGSRRTLFTISGGVLGFALVLALCALG 60

Query: 61  IGALVAQSALAFTLIKWIGAAYLVWLGIQKWRDRAPL---TATTTSHELSQAALLRKAVL 117
           +GAL+  SA AFT +K  G  YL+WLG   WR  AP+   TA TTS  L + +L R+ ++
Sbjct: 61  LGALIQASASAFTALKIAGGLYLIWLGYGLWR-AAPVSLETAATTS--LRRWSLFRQGLV 117

Query: 118 INLTNPKSIVFLVALFPQFIDPTRDHWPQFLVLGITTVTIDAIVMFGYTALAAQLGRYIR 177
             L+NPK+++   A+ P F+DP R+   Q  ++ +T   ++ +V +   + A ++  ++ 
Sbjct: 118 SALSNPKALLLFTAVIPPFLDPHRNIITQTAIIALTYAVVEFVVEYLVASAAHRVRPWLA 177

Query: 178 SPNIMTRMNKLFGSMFMGCGMLL 200
                 R NK+ G  F+  G+ L
Sbjct: 178 RTG--RRFNKVCGGFFVLFGVAL 198