Pairwise Alignments

Query, 205 a.a., homoserine/homoserine lactone efflux protein from Vibrio cholerae E7946 ATCC 55056

Subject, 207 a.a., lysine exporter protein LysE/YggA (RefSeq) from Shewanella loihica PV-4

 Score =  113 bits (283), Expect = 2e-30
 Identities = 62/205 (30%), Positives = 109/205 (53%), Gaps = 3/205 (1%)

Query: 1   MDIHVWLAYLLTAVVFSLAPGSGTVNSISNGLSYGTRHSLGAIIGLQIGLACHIVLVGIG 60
           M++  WL YL   ++ +++PG+  V S+S+G+ +G   SL   +G        +     G
Sbjct: 1   MNLDTWLLYLAAILLIAISPGTMAVLSMSHGIHFGKVRSLATALGSVSSALLLMFASAAG 60

Query: 61  IGALVAQSALAFTLIKWIGAAYLVWLGIQKWRDRAPLTATTTSH---ELSQAALLRKAVL 117
           +GAL++ +   FTL+K+ GAAYL++LGI+    +A        H   + S   + ++A L
Sbjct: 61  LGALLSATEYGFTLLKYCGAAYLIYLGIKLILTKASAQGLDLQHIKGKGSPKQMFKEAFL 120

Query: 118 INLTNPKSIVFLVALFPQFIDPTRDHWPQFLVLGITTVTIDAIVMFGYTALAAQLGRYIR 177
           + ++NPK ++F  ALFPQFID T    PQ  +L +T   +D   +  Y ++A  L   +R
Sbjct: 121 VGISNPKDLLFFGALFPQFIDITAPQGPQLAILALTWALVDFSFVMIYASMANVLAPKLR 180

Query: 178 SPNIMTRMNKLFGSMFMGCGMLLAT 202
           + N +   ++    +F+    +L T
Sbjct: 181 ASNRLHWFDRTSSGVFLSLAAILVT 205