Pairwise Alignments

Query, 205 a.a., homoserine/homoserine lactone efflux protein from Vibrio cholerae E7946 ATCC 55056

Subject, 205 a.a., lysine exporter protein LysE/YggA (RefSeq) from Shewanella loihica PV-4

 Score =  102 bits (254), Expect = 5e-27
 Identities = 59/203 (29%), Positives = 105/203 (51%), Gaps = 2/203 (0%)

Query: 1   MDIHVWLAYLLTAVVF-SLAPGSGTVNSISNGLSYGTRHSLGAIIGLQIGLACHIVLVGI 59
           M  H+ +A  L    F S+ PG     +++ G+S G R +L  +IG   G+A   V   +
Sbjct: 1   MSDHILIAVFLPTFFFVSITPGMCMTLAMTLGMSIGVRRTLWMMIGELAGVALVAVAAVM 60

Query: 60  GIGALVAQSALAFTLIKWIGAAYLVWLGIQKWRDRAPLTA-TTTSHELSQAALLRKAVLI 118
           G+ A++      F ++KW+G AYL ++GIQ WR +  + +    S ++S  AL+ +  + 
Sbjct: 61  GVAAMMLNYPQIFEVLKWVGGAYLGYIGIQMWRAKGKMASLDNQSTQISNQALISQGFVT 120

Query: 119 NLTNPKSIVFLVALFPQFIDPTRDHWPQFLVLGITTVTIDAIVMFGYTALAAQLGRYIRS 178
            + NPK   F+++L P FID  R   PQ  +L +  +  + + M  Y +    L  ++  
Sbjct: 121 AIANPKGWAFMISLLPPFIDVERAVAPQLSLLLMIIMMTEFVSMLAYASGGKSLKLFLAK 180

Query: 179 PNIMTRMNKLFGSMFMGCGMLLA 201
            + +  +N++ GS+ +G G  LA
Sbjct: 181 GDNIKWLNRIAGSLMIGVGFWLA 203