Pairwise Alignments

Query, 205 a.a., homoserine/homoserine lactone efflux protein from Vibrio cholerae E7946 ATCC 55056

Subject, 208 a.a., amino acid efflux permease from Caulobacter crescentus NA1000

 Score = 94.7 bits (234), Expect = 1e-24
 Identities = 63/203 (31%), Positives = 102/203 (50%), Gaps = 14/203 (6%)

Query: 7   LAYLLTAVVFSLAPGSGTVNSISNGLSYGTRHSLGAIIGLQIGLACHIVLVGIGIGALVA 66
           +A+ L A + +L PG  T   I    + G R + GA IG+ +G          G+GAL+ 
Sbjct: 8   IAFTLAAGLLTLTPGLDTALVIRTAAAEGPRRAAGAAIGIGLGCLIWGAAASFGVGALLT 67

Query: 67  QSALAFTLIKWIGAAYLVWLGIQ---KWRDRAPLTATTTSHELSQAALLRKAVLINLTNP 123
            S  A+T++KW+GA YL W G++   K R+ A     T + +    A LR+ +L NL NP
Sbjct: 68  ASQTAYTVLKWVGALYLAWTGLRMILKPRE-AFEPGETRAVDAGPMAALRRGLLTNLLNP 126

Query: 124 KSIVFLVALFPQF----IDPTRDHWPQFLVLGITTVTIDAIVMFG-YTALAAQLGRYIRS 178
           K  +F V+  PQF    +DP R     F +L  T   ++ ++ F    A    +   +R 
Sbjct: 127 KVGIFYVSFLPQFMPVGVDPAR-----FGLLLTTIHVVEGLLWFALLIAATVPIAGLLRL 181

Query: 179 PNIMTRMNKLFGSMFMGCGMLLA 201
           P ++  +++  G +F+  G+ LA
Sbjct: 182 PGVVRWLDRTTGLVFVAFGLRLA 204