Pairwise Alignments

Query, 198 a.a., DTW domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 197 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 86.7 bits (213), Expect = 3e-22
 Identities = 51/161 (31%), Positives = 86/161 (53%), Gaps = 5/161 (3%)

Query: 5   CPDCGLKFQ-CLCSAVPSFHAPFQLSLLTHDNEWQRETNTGRWLVKSMAECQAYTWSRVA 63
           CP C      CLCS +       QL +L H +E + + N+ R L   + + Q Y     A
Sbjct: 6   CPTCCYPMNACLCSHLQQIKPQTQLLVLQHPSEVEHKKNSVRVLSLVIPDTQVYVGESEA 65

Query: 64  ANTELQARLTQPNARSFLVYPSEESVELTDALRSLREDEIAHFIVLDATWQEARKMERKS 123
               L+A+L++     +LVYPSE+S  +    +S+  D +   +++D TW++A K+ + +
Sbjct: 66  DFAALRAQLSRCQRPIYLVYPSEQSASVES--QSICVDCV--LLLIDGTWRKAFKILQLN 121

Query: 124 PWLADVPRVHLTTDHVSAYRLRRNQQPGNLCTLEVGLMLLR 164
           PWLA  P VHL   + S Y++R++ +  +L TLE    +L+
Sbjct: 122 PWLAQFPAVHLAQGYASRYKIRKSSRSDSLSTLEASAYMLK 162