Pairwise Alignments

Query, 198 a.a., DTW domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 251 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 85.5 bits (210), Expect = 7e-22
 Identities = 55/181 (30%), Positives = 91/181 (50%), Gaps = 6/181 (3%)

Query: 5   CPDCGLKFQ-CLCSAVPSFHAPFQLSLLTHDNEWQRETNTGRWLVKSMAECQAYTWSRVA 63
           CP C L  Q C CS            L+ +++E  + TN+GR +   + +  A+ WSR  
Sbjct: 33  CPLCLLGEQFCTCSLRKQLTTQASFLLIMYNDEVLKPTNSGRLIADLIPDTHAFLWSRTD 92

Query: 64  ANTELQARLTQPNARSFLVYPSE-----ESVELTDALRSLREDEIAHFIVLDATWQEARK 118
              EL A L+  + + FLV+P++     ++V     + +L + +    I+LD +W+EA K
Sbjct: 93  PAPELLALLSSDHYQPFLVFPAQYADQGQTVLSQVPMATLAKGKRPLLIMLDGSWREAIK 152

Query: 119 MERKSPWLADVPRVHLTTDHVSAYRLRRNQQPGNLCTLEVGLMLLRHFNAEASAEALEQF 178
           M RKSP+L  +P +    D ++ Y LR+      L T EV  + L     EA+ +AL  +
Sbjct: 153 MFRKSPYLQGLPILSFDPDTLATYALRKGSHDFQLGTAEVASLALAAMGEEANGKALTAW 212

Query: 179 Y 179
           +
Sbjct: 213 F 213